Genomics Guided Selection of Cancer in vitro Models


v1.0.0 (beta)


          


Underlying data available at the GDSC1000 data portal.



Download Search Space

Tutorial available here.

Representative Cell Line Selection
CELLect Cell Lines
Score cell lines Cell lines SubTypes Map

Please cite: Najgebauer et al. 2018 - CELLector: Genomics Guided Selection of Cancer in vitro Models

Primary Tumours: Subtyping Criteria

Supervised Search Space Construction


Id decoding for recurrently CN altered chromosomal segments (values in Id column can be used in box 1)

Full decoding table available at the GDSC1000 data portal

Id decoding for informative CpG island hyper-methylations (values in Id column can be used in box 1)

Full decoding table available at the GDSC1000 data portal

Legend

Genomic Binary Event Matrix (BEM) builder


v1.0.0 (beta)

Primary tumours


            

in-vitro models